IMAGIC Manuals

Click into the image or the link to read or download the wanted manual (PDF format).


INTRODUCTION


A brief introduction to IMAGIC

   

GISP

The GISP program follows the work-flow of a typical 4D alignment-by-Classification single particles analysis


GISP

     

PLAYING WITH...


Playing with IMAGIC
Terminal Mode


Playing with IMAGIC
GISP

   

GUI IMAGIC

IMAGIC commands in a GUI oriented environment


IMAGIC

     

DISPLAY
images/3D volumes


PLOT
Display spectra/curves


DISPLAY
with Colour Mapping


IMPORT
to IMAGIC

SINGLE PARTICLE ANALYSIS


An example:
Wormhemoglobin Analysis
Terminal Mode


An example:
Wormhemoglobin Analysis
GISP

   

IMAGIC CONVERSION PROGRAM

Convert images/3D volumes&7spectar from/to formats used in 3DEM and other fields.


Data Conversion

     

OTHER IMAGIC GUI (STANDALONE) PROGRAMS


Find and correct
Anisotropic Magnification


(Multi-) Reference Alignemnt of Images


Camera/Detector Correction

 


Find and correct for CTF


Global and Local Resolution/Information Content


Cryo-EM Movie Alignment

 


Multivariate Statistical Analysis and Classification


Detect and Extract Particles


Mask, filter, normalise images/3D volumes/spectra

 

SPECIFIC IMAGIC GUI APPLICATIONS


Detector Analysis


Spectra Analysis

   

GUI PROGRAMS MENU:


GUI programs:
Listing and start icons

     

OLD SPECIFIC APPLICATIONS (Terminal Mode)


2-D Crystals


Spectra Analysis


2-D Shape Analysis
- No more supported -

 

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